Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | LPB072_RS08775 | Not Available | Negative | 1891167 - 1891697 | 19291.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | LPB072_RS08780 | Not Available | Negative | 1891837 - 1892301 | 16528.0 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | LPB072_RS08785 | Not Available | Negative | 1892333 - 1893457 | 40055.2 |
| riboflavin synthase | LPB072_RS08790 | Not Available | Negative | 1893454 - 1894101 | 22720.3 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | LPB072_RS08795 | Not Available | Negative | 1894201 - 1895295 | 38892.0 |
| type iv pilin protein | LPB072_RS08800 | Not Available | Negative | 1895382 - 1895885 | 17802.2 |
| pilus assembly protein | LPB072_RS08805 | Not Available | Negative | 1895897 - 1900246 | 155967.0 |
| hypothetical protein | LPB072_RS08810 | Not Available | Negative | 1900276 - 1900881 | 21540.6 |
| pilw family protein | LPB072_RS08815 | Not Available | Negative | 1900916 - 1901944 | 35870.2 |
| type iv pilus modification protein pilv | LPB072_RS08820 | Not Available | Negative | 1901941 - 1902558 | 21102.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
