Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | LPB072_RS08475 | Not Available | Negative | 1826620 - 1827699 | 39466.5 |
| caib/baif coa transferase family protein | LPB072_RS08480 | Not Available | Negative | 1827743 - 1828909 | 41594.7 |
| 4-aminobutyrate--2-oxoglutarate transaminase | LPB072_RS08485 | Not Available | Negative | 1828909 - 1830204 | 45638.1 |
| plp-dependent aminotransferase family protein | LPB072_RS08490 | Not Available | Positive | 1830355 - 1831761 | 52000.3 |
| alanine--trna ligase | LPB072_RS08495 | Not Available | Positive | 1831884 - 1834505 | 93908.8 |
| pseudouridine synthase | LPB072_RS08500 | Not Available | Negative | 1834714 - 1835655 | 35089.9 |
| trna (guanosine(46)-n7)-methyltransferase trmb | LPB072_RS08505 | Not Available | Negative | 1835697 - 1836407 | 26364.8 |
| 7tm diverse intracellular signaling domain-containing protein | LPB072_RS08510 | Not Available | Negative | 1836602 - 1838296 | 63506.9 |
| oxygenase mpab family protein | LPB072_RS08515 | Not Available | Negative | 1838404 - 1839777 | 50805.6 |
| carotenoid biosynthesis protein | LPB072_RS08520 | Not Available | Negative | 1839777 - 1840619 | 30878.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
