Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase subunit b | LPB072_RS08375 | Not Available | Positive | 1804420 - 1805058 | 22698.9 |
| tolc family protein | LPB072_RS08380 | Not Available | Negative | 1805211 - 1806764 | 54368.3 |
| peptidase domain-containing abc transporter | LPB072_RS08385 | Not Available | Negative | 1806761 - 1808950 | 80710.8 |
| hlyd family secretion protein | LPB072_RS08390 | Not Available | Negative | 1808976 - 1810277 | 47927.1 |
| Trna-gly | Not Available | Not Available | Positive | 1810495 - 1810568 | Not Available |
| dsre family protein | LPB072_RS08400 | Not Available | Negative | 1810937 - 1811389 | 16101.5 |
| choline dehydrogenase | LPB072_RS08405 | Not Available | Negative | 1811519 - 1813204 | 61995.6 |
| betaine-aldehyde dehydrogenase | LPB072_RS08410 | Not Available | Negative | 1813229 - 1814698 | 51907.9 |
| choline abc transporter atp-binding protein | LPB072_RS08415 | Not Available | Negative | 1814778 - 1815959 | 43246.7 |
| choline abc transporter permease subunit | LPB072_RS08420 | Not Available | Negative | 1815956 - 1816798 | 30029.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
