Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-dependent carboxyltransferase family protein | LPB072_RS00805 | Not Available | Negative | 165027 - 166004 | 33989.8 |
| 5-oxoprolinase subunit b family protein | LPB072_RS00810 | Not Available | Negative | 165994 - 166890 | 33612.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | LPB072_RS00815 | Not Available | Negative | 166887 - 168329 | 51070.1 |
| acetyl-coa carboxylase | LPB072_RS00820 | Not Available | Negative | 168343 - 168591 | 8606.13 |
| 5-oxoprolinase subunit pxpa | LPB072_RS00825 | Not Available | Negative | 168623 - 169369 | 26547.2 |
| lysr family transcriptional regulator | LPB072_RS00830 | Not Available | Positive | 169639 - 170565 | 34805.6 |
| pilt/pilu family type 4a pilus atpase | LPB072_RS00835 | Not Available | Negative | 170615 - 171748 | 41482.1 |
| hotdog fold thioesterase | LPB072_RS00840 | Not Available | Negative | 171842 - 172264 | 15015.2 |
| ribbon-helix-helix domain-containing protein | LPB072_RS00845 | Not Available | Negative | 172382 - 172795 | 15053.3 |
| dj-1/pfpi family protein | LPB072_RS00850 | Not Available | Negative | 172845 - 173423 | 20557.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
