Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | LPB072_RS08325 | Not Available | Positive | 1796568 - 1797470 | 32256.6 |
| acyl-coa thioesterase | LPB072_RS08330 | Not Available | Positive | 1797481 - 1797933 | 16679.1 |
| ompa family protein | LPB072_RS08335 | Not Available | Positive | 1798140 - 1798976 | 30394.1 |
| hypothetical protein | LPB072_RS08340 | Not Available | Positive | 1798983 - 1799279 | 10844.3 |
| peroxidase-related enzyme | LPB072_RS08345 | Not Available | Negative | 1799294 - 1799872 | 21532.8 |
| 4-carboxymuconolactone decarboxylase | LPB072_RS08350 | Not Available | Positive | 1799968 - 1800339 | 13488.0 |
| helix-turn-helix transcriptional regulator | LPB072_RS08355 | Not Available | Negative | 1800501 - 1801319 | 31172.3 |
| indoleacetamide hydrolase | LPB072_RS08360 | Not Available | Positive | 1801514 - 1803025 | 51693.4 |
| pas and helix-turn-helix domain-containing protein | LPB072_RS08365 | Not Available | Negative | 1803033 - 1803542 | 19190.1 |
| coa transferase subunit a | LPB072_RS08370 | Not Available | Positive | 1803707 - 1804408 | 25222.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
