Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | LPB072_RS08220 | Not Available | Negative | 1769053 - 1770231 | 43107.5 |
| aaa family atpase | LPB072_RS08225 | Not Available | Negative | 1770228 - 1771175 | 34980.0 |
| srpbcc family protein | LPB072_RS08230 | Not Available | Negative | 1771178 - 1771846 | 23146.7 |
| aerobic carbon-monoxide dehydrogenase large subunit | LPB072_RS08235 | Not Available | Negative | 1771994 - 1774405 | 87064.2 |
| (2fe-2s)-binding protein | LPB072_RS08240 | Not Available | Negative | 1774431 - 1774901 | 16946.3 |
| fad binding domain-containing protein | LPB072_RS08245 | Not Available | Negative | 1774789 - 1775796 | 36184.4 |
| lyttr family transcriptional regulator | LPB072_RS08250 | Not Available | Negative | 1776012 - 1776764 | 27834.2 |
| b12-binding domain-containing radical sam protein | LPB072_RS08255 | Not Available | Negative | 1777182 - 1779074 | 69541.3 |
| atp-binding protein | LPB072_RS08265 | Not Available | Positive | 1779502 - 1782243 | 99513.8 |
| l-serine ammonia-lyase | LPB072_RS08270 | Not Available | Negative | 1782300 - 1783691 | 49071.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
