Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase | LPB072_RS08065 | Not Available | Positive | 1733372 - 1735234 | 65688.2 |
| patatin-like phospholipase family protein | LPB072_RS08070 | Not Available | Negative | 1735309 - 1737222 | 70275.7 |
| fumarylacetoacetase | LPB072_RS08075 | Not Available | Negative | 1737558 - 1738883 | 47208.9 |
| homogentisate 1,2-dioxygenase | LPB072_RS08080 | Not Available | Negative | 1738918 - 1740225 | 48434.1 |
| duf2783 domain-containing protein | LPB072_RS08085 | Not Available | Negative | 1740383 - 1740577 | 6762.13 |
| fad-dependent monooxygenase | LPB072_RS08090 | Not Available | Negative | 1740588 - 1742279 | 62199.0 |
| marr family winged helix-turn-helix transcriptional regulator | LPB072_RS08095 | Not Available | Positive | 1742804 - 1743280 | 17274.8 |
| pseudouridine synthase | LPB072_RS08100 | Not Available | Positive | 1743489 - 1744055 | 20840.3 |
| tripartite tricarboxylate transporter substrate binding protein | LPB072_RS08105 | Not Available | Positive | 1744205 - 1745161 | 32349.6 |
| dna glycosylase alkz-like family protein | LPB072_RS08110 | Not Available | Negative | 1745221 - 1746333 | 41792.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
