Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | LPB072_RS07960 | Not Available | Negative | 1710745 - 1711575 | 29820.6 |
| hypothetical protein | LPB072_RS07965 | Not Available | Positive | 1711671 - 1711946 | 9299.92 |
| pas domain-containing sensor histidine kinase | LPB072_RS07970 | Not Available | Negative | 1712148 - 1714247 | 76828.6 |
| hpf/raia family ribosome-associated protein | LPB072_RS07980 | Not Available | Negative | 1714789 - 1715154 | 13192.4 |
| hypothetical protein | LPB072_RS23850 | Not Available | Positive | 1715407 - 1715571 | 6559.89 |
| pard-like family protein | LPB072_RS07985 | Not Available | Positive | 1715754 - 1716026 | 9568.71 |
| type i methionyl aminopeptidase | LPB072_RS07990 | Not Available | Positive | 1716026 - 1716820 | 28737.7 |
| voc family protein | LPB072_RS07995 | Not Available | Negative | 1716839 - 1717219 | 13181.5 |
| taud/tfda family dioxygenase | LPB072_RS08005 | Not Available | Negative | 1717774 - 1718664 | 32240.0 |
| hypothetical protein | LPB072_RS08010 | Not Available | Negative | 1718938 - 1719534 | 23443.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
