Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | LPB072_RS07860 | Not Available | Positive | 1689089 - 1689682 | 21635.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | LPB072_RS07865 | Not Available | Positive | 1689736 - 1690512 | 28498.1 |
| 50s ribosomal protein l19 | LPB072_RS07870 | Not Available | Positive | 1690659 - 1691024 | 13682.8 |
| coa pyrophosphatase | LPB072_RS07875 | Not Available | Positive | 1691200 - 1691883 | 25304.7 |
| cobd/cbib family protein | LPB072_RS07880 | Not Available | Positive | 1691915 - 1692865 | 34800.1 |
| rna polymerase sigma factor rpoh | LPB072_RS07885 | Not Available | Negative | 1693038 - 1693994 | 35334.3 |
| marr family winged helix-turn-helix transcriptional regulator | LPB072_RS07890 | Not Available | Negative | 1694333 - 1694755 | 15267.1 |
| fad-dependent monooxygenase | LPB072_RS07895 | Not Available | Positive | 1694886 - 1696796 | 69572.9 |
| hypothetical protein | LPB072_RS23105 | Not Available | Negative | 1696904 - 1697107 | 7312.49 |
| hypothetical protein | LPB072_RS07900 | Not Available | Positive | 1697590 - 1698015 | 14457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
