Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | LPB072_RS07665 | Not Available | Positive | 1657285 - 1657704 | 15248.7 |
| voc family protein | LPB072_RS07670 | Not Available | Positive | 1657935 - 1658336 | 13974.5 |
| hypothetical protein | LPB072_RS07675 | Not Available | Positive | 1658354 - 1658791 | 15836.9 |
| long-chain fatty acid--coa ligase | LPB072_RS07680 | Not Available | Negative | 1658965 - 1660659 | 62304.2 |
| trap transporter large permease | LPB072_RS07685 | Not Available | Negative | 1660776 - 1662098 | 46453.0 |
| trap transporter small permease subunit | LPB072_RS07690 | Not Available | Negative | 1662095 - 1662688 | 21596.0 |
| c4-dicarboxylate trap transporter substrate-binding protein | LPB072_RS07695 | Not Available | Negative | 1662690 - 1663763 | 38396.0 |
| osmc family protein | LPB072_RS07700 | Not Available | Negative | 1664166 - 1664720 | 20280.1 |
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS07705 | Not Available | Negative | 1664850 - 1665635 | 27669.7 |
| cyclase family protein | LPB072_RS07710 | Not Available | Negative | 1665645 - 1666670 | 37097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
