Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| meta domain-containing protein | LPB072_RS07565 | Not Available | Negative | 1635049 - 1635510 | 16664.1 |
| tatd family hydrolase | LPB072_RS07570 | Not Available | Positive | 1635588 - 1636424 | 29893.3 |
| dna-deoxyinosine glycosylase | LPB072_RS07575 | Not Available | Positive | 1636421 - 1636918 | 18450.1 |
| spermidine synthase | LPB072_RS07580 | Not Available | Positive | 1637006 - 1637788 | 29223.1 |
| gspe/pule family protein | LPB072_RS07585 | Not Available | Positive | 1637810 - 1639639 | 67549.7 |
| crp/fnr family transcriptional regulator | LPB072_RS07590 | Not Available | Positive | 1639716 - 1640426 | 26443.4 |
| dmt family transporter | LPB072_RS07595 | Not Available | Positive | 1640543 - 1641472 | 32786.5 |
| sdr family oxidoreductase | LPB072_RS07600 | Not Available | Positive | 1641488 - 1642285 | 27021.4 |
| potassium/proton antiporter | LPB072_RS07605 | Not Available | Negative | 1642356 - 1643843 | 51782.3 |
| zinc ribbon domain-containing protein yjdm | LPB072_RS07610 | Not Available | Positive | 1643975 - 1644325 | 12156.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
