Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | LPB072_RS07520 | Not Available | Positive | 1625854 - 1626843 | 35248.6 |
| lytr/algr family response regulator transcription factor | LPB072_RS07525 | Not Available | Positive | 1626879 - 1627619 | 27488.4 |
| hypothetical protein | LPB072_RS07530 | Not Available | Positive | 1627720 - 1628352 | 24184.4 |
| duf2164 domain-containing protein | LPB072_RS07535 | Not Available | Positive | 1628383 - 1628658 | 10406.2 |
| bluf domain-containing protein | LPB072_RS07540 | Not Available | Positive | 1628723 - 1629172 | 16873.1 |
| barstar family protein | LPB072_RS24195 | Not Available | Negative | 1629296 - 1629457 | 5718.74 |
| single-stranded-dna-specific exonuclease recj | LPB072_RS07545 | Not Available | Negative | 1629709 - 1631445 | 62702.7 |
| phosphoglycerate mutase | LPB072_RS07550 | Not Available | Negative | 1631681 - 1632667 | 35817.3 |
| lipoprotein-releasing abc transporter permease subunit | LPB072_RS07555 | Not Available | Positive | 1632719 - 1633975 | 45051.7 |
| lipoprotein-releasing abc transporter atp-binding protein lold | LPB072_RS07560 | Not Available | Positive | 1634354 - 1635034 | 24011.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
