Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase d-like domain-containing protein | LPB072_RS07365 | Not Available | Positive | 1588263 - 1589546 | 47452.2 |
| tspo/mbr family protein | LPB072_RS07370 | Not Available | Positive | 1590140 - 1590697 | 20330.9 |
| yihy/virulence factor brkb family protein | LPB072_RS07375 | Not Available | Positive | 1590815 - 1591774 | 34135.8 |
| hypothetical protein | LPB072_RS07380 | Not Available | Negative | 1592106 - 1592732 | 22466.9 |
| phage holin family protein | LPB072_RS07385 | Not Available | Negative | 1592729 - 1593112 | 13418.7 |
| hypothetical protein | LPB072_RS07390 | Not Available | Negative | 1593243 - 1593668 | 14752.4 |
| duf1328 domain-containing protein | LPB072_RS07395 | Not Available | Negative | 1593735 - 1593896 | 5558.33 |
| aaa family atpase | LPB072_RS07400 | Not Available | Negative | 1594118 - 1595680 | 57350.5 |
| ai-2e family transporter | LPB072_RS07405 | Not Available | Negative | 1595809 - 1598253 | 85961.9 |
| asma family protein | LPB072_RS07410 | Not Available | Negative | 1598250 - 1600325 | 72995.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
