Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | LPB072_RS06980 | Not Available | Negative | 1497027 - 1498295 | 46452.5 |
| oligoribonuclease | LPB072_RS06985 | Not Available | Positive | 1498369 - 1498938 | 21413.7 |
| inorganic phosphate transporter | LPB072_RS06990 | Not Available | Positive | 1499010 - 1500596 | 55403.0 |
| dead/deah box helicase | LPB072_RS06995 | Not Available | Positive | 1501007 - 1502977 | 71737.3 |
| acyltransferase family protein | LPB072_RS07000 | Not Available | Negative | 1503199 - 1505166 | 74067.5 |
| saf domain-containing protein | LPB072_RS07005 | Not Available | Negative | 1505275 - 1506417 | 40591.8 |
| polysaccharide biosynthesis protein | LPB072_RS07010 | Not Available | Negative | 1506484 - 1508406 | 69984.8 |
| sugar transferase | LPB072_RS07015 | Not Available | Negative | 1508414 - 1508974 | 20905.8 |
| udp-glucose 4-epimerase family protein | LPB072_RS07020 | Not Available | Negative | 1508971 - 1509909 | 33639.8 |
| acyltransferase family protein | LPB072_RS07025 | Not Available | Negative | 1509911 - 1511023 | 40485.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
