Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | LPB072_RS06930 | Not Available | Negative | 1488760 - 1489440 | 24783.1 |
| hugz family protein | LPB072_RS06935 | Not Available | Negative | 1489437 - 1489925 | 17329.6 |
| ompa family protein | LPB072_RS06940 | Not Available | Negative | 1489949 - 1490575 | 21984.3 |
| fecr domain-containing protein | LPB072_RS06945 | Not Available | Negative | 1490590 - 1491057 | 16011.0 |
| trna dihydrouridine synthase | LPB072_RS06950 | Not Available | Positive | 1491235 - 1492260 | 36731.4 |
| glutamate--cysteine ligase | LPB072_RS06955 | Not Available | Positive | 1492307 - 1493878 | 57266.8 |
| class i sam-dependent methyltransferase | LPB072_RS06960 | Not Available | Negative | 1494032 - 1494658 | 22564.5 |
| ribosome biogenesis gtpase ylqf | LPB072_RS06965 | Not Available | Positive | 1494741 - 1495676 | 34223.5 |
| ribosome small subunit-dependent gtpase a | LPB072_RS06970 | Not Available | Negative | 1495689 - 1496669 | 35783.6 |
| 4a-hydroxytetrahydrobiopterin dehydratase | LPB072_RS06975 | Not Available | Negative | 1496701 - 1497021 | 11719.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
