Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| barstar family protein | LPB072_RS00660 | Not Available | Positive | 131764 - 134646 | 103356.0 |
| carboxyl transferase domain-containing protein | LPB072_RS00665 | Not Available | Positive | 135460 - 137244 | 62248.7 |
| response regulator | LPB072_RS00670 | Not Available | Negative | 137318 - 137797 | 17411.7 |
| pas domain s-box protein | LPB072_RS00675 | Not Available | Negative | 137794 - 141639 | 144529.0 |
| fad-linked oxidase c-terminal domain-containing protein | LPB072_RS00680 | Not Available | Negative | 141690 - 143192 | 53316.3 |
| hsp20/alpha crystallin family protein | LPB072_RS00685 | Not Available | Positive | 143415 - 143837 | 15474.5 |
| lysr substrate-binding domain-containing protein | LPB072_RS00690 | Not Available | Negative | 143963 - 144832 | 32259.0 |
| formyltetrahydrofolate deformylase | LPB072_RS00695 | Not Available | Negative | 145142 - 145990 | 31684.1 |
| spfh and helix-turn-helix domain-containing protein | LPB072_RS00700 | Not Available | Positive | 146090 - 147157 | 38695.5 |
| hypothetical protein | LPB072_RS00705 | Not Available | Positive | 147165 - 148232 | 39588.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
