Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1631 family protein | LPB072_RS06780 | Not Available | Positive | 1458659 - 1460890 | 82287.2 |
| hypothetical protein | LPB072_RS06785 | Not Available | Positive | 1460901 - 1461446 | 19786.9 |
| energy-dependent translational throttle protein etta | LPB072_RS06790 | Not Available | Positive | 1461588 - 1463249 | 61346.9 |
| duf1415 domain-containing protein | LPB072_RS06795 | Not Available | Positive | 1463409 - 1463948 | 20118.8 |
| duf1631 family protein | LPB072_RS06800 | Not Available | Positive | 1464097 - 1465479 | 49894.2 |
| taxi family trap transporter solute-binding subunit | LPB072_RS06805 | Not Available | Negative | 1465495 - 1466829 | 49265.3 |
| heavy metal sensor histidine kinase | LPB072_RS06810 | Not Available | Negative | 1466871 - 1468250 | 51348.0 |
| heavy metal response regulator transcription factor | LPB072_RS06815 | Not Available | Negative | 1468247 - 1468933 | 25844.6 |
| hypothetical protein | LPB072_RS06820 | Not Available | Positive | 1469035 - 1470177 | 41322.5 |
| multicopper oxidase family protein | LPB072_RS06825 | Not Available | Positive | 1470194 - 1471636 | 52863.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
