Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit gamma | LPB072_RS06730 | Not Available | Positive | 1447411 - 1447869 | 16390.8 |
| formate dehydrogenase beta subunit | LPB072_RS06735 | Not Available | Positive | 1447866 - 1449425 | 54815.1 |
| formate dehydrogenase subunit alpha | LPB072_RS06740 | Not Available | Positive | 1449438 - 1452329 | 105001.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | LPB072_RS06745 | Not Available | Positive | 1452353 - 1453156 | 28475.2 |
| formate dehydrogenase subunit delta | LPB072_RS06750 | Not Available | Positive | 1453182 - 1453406 | 8590.32 |
| sensor histidine kinase | LPB072_RS06755 | Not Available | Negative | 1453394 - 1454803 | 50702.8 |
| response regulator transcription factor | LPB072_RS06760 | Not Available | Negative | 1454800 - 1455462 | 24641.8 |
| hypothetical protein | LPB072_RS06765 | Not Available | Negative | 1455658 - 1455933 | 9107.1 |
| hypothetical protein | LPB072_RS23670 | Not Available | Negative | 1456086 - 1456364 | 8836.7 |
| barstar family protein | LPB072_RS06775 | Not Available | Negative | 1456479 - 1458334 | 65251.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
