Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | LPB072_RS06630 | Not Available | Negative | 1424875 - 1425816 | 35571.2 |
| d-arabinitol 4-dehydrogenase | LPB072_RS06635 | Not Available | Negative | 1425843 - 1427261 | 51710.7 |
| sdr family oxidoreductase | LPB072_RS06640 | Not Available | Negative | 1427272 - 1428000 | 25986.8 |
| abc transporter atp-binding protein | LPB072_RS06645 | Not Available | Negative | 1428026 - 1429072 | 37684.6 |
| carbohydrate abc transporter permease | LPB072_RS06650 | Not Available | Negative | 1429213 - 1430043 | 30342.6 |
| carbohydrate abc transporter permease | LPB072_RS06655 | Not Available | Negative | 1430053 - 1430913 | 31946.2 |
| abc transporter substrate-binding protein | LPB072_RS06660 | Not Available | Negative | 1431046 - 1432317 | 45893.0 |
| shikimate dehydrogenase | LPB072_RS06665 | Not Available | Positive | 1432602 - 1433459 | 29735.8 |
| lysr family transcriptional regulator | LPB072_RS06670 | Not Available | Positive | 1433875 - 1434831 | 35137.9 |
| amidase | LPB072_RS06675 | Not Available | Positive | 1434933 - 1436462 | 54393.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
