Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2062 domain-containing protein | LPB072_RS06530 | Not Available | Negative | 1401979 - 1402563 | 21761.0 |
| lytic murein transglycosylase b | LPB072_RS06535 | Not Available | Negative | 1402605 - 1403711 | 40625.2 |
| transglutaminasetgpa domain-containing protein | LPB072_RS06540 | Not Available | Negative | 1403708 - 1405708 | 74155.8 |
| duf58 domain-containing protein | LPB072_RS06545 | Not Available | Negative | 1405759 - 1406766 | 36888.7 |
| aaa family atpase | LPB072_RS06550 | Not Available | Negative | 1406812 - 1407732 | 33125.1 |
| histone deacetylase family protein | LPB072_RS06555 | Not Available | Positive | 1407759 - 1408712 | 34831.5 |
| universal stress protein | LPB072_RS06560 | Not Available | Negative | 1408729 - 1409175 | 15517.8 |
| enoyl-coa hydratase | LPB072_RS06565 | Not Available | Positive | 1409274 - 1410056 | 28271.4 |
| mechanosensitive ion channel family protein | LPB072_RS06570 | Not Available | Positive | 1410107 - 1411393 | 45933.8 |
| trap transporter large permease | LPB072_RS06575 | Not Available | Negative | 1411410 - 1412702 | 45561.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
