Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4406 domain-containing protein | LPB072_RS06430 | Not Available | Negative | 1375452 - 1375865 | 14630.7 |
| deor/glpr family dna-binding transcription regulator | LPB072_RS06435 | Not Available | Positive | 1376031 - 1376795 | 26675.5 |
| translesion dna synthesis-associated protein imua | LPB072_RS06440 | Not Available | Positive | 1376907 - 1377782 | 30885.6 |
| y-family dna polymerase | LPB072_RS06445 | Not Available | Positive | 1377721 - 1379055 | 48758.1 |
| error-prone dna polymerase | LPB072_RS06450 | Not Available | Positive | 1379318 - 1382605 | 122188.0 |
| histidine phosphatase family protein | LPB072_RS06455 | Not Available | Negative | 1382873 - 1384054 | 40911.7 |
| hypothetical protein | LPB072_RS06460 | Not Available | Negative | 1384051 - 1386357 | 83314.3 |
| hypothetical protein | LPB072_RS06465 | Not Available | Negative | 1386375 - 1389344 | 108270.0 |
| molybdate abc transporter substrate-binding protein | LPB072_RS06470 | Not Available | Negative | 1390165 - 1390866 | 24282.3 |
| plasmid replication/partition related protein | LPB072_RS06475 | Not Available | Positive | 1391048 - 1391896 | 30400.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
