Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | LPB072_RS06380 | Not Available | Negative | 1362570 - 1363787 | 43343.1 |
| dmt family transporter | LPB072_RS06385 | Not Available | Positive | 1364142 - 1365206 | 37135.0 |
| hypothetical protein | LPB072_RS06390 | Not Available | Negative | 1365296 - 1365727 | 15900.2 |
| response regulator transcription factor | LPB072_RS06395 | Not Available | Negative | 1366019 - 1366660 | 23098.1 |
| pas domain-containing sensor histidine kinase | LPB072_RS06400 | Not Available | Negative | 1366657 - 1368834 | 78112.1 |
| sensor histidine kinase | LPB072_RS06405 | Not Available | Positive | 1369155 - 1371272 | 76930.9 |
| patatin-like phospholipase family protein | LPB072_RS06410 | Not Available | Negative | 1371364 - 1372461 | 40178.7 |
| pyridoxamine 5'-phosphate oxidase family protein | LPB072_RS06415 | Not Available | Negative | 1372582 - 1373220 | 23369.0 |
| plp-dependent aminotransferase family protein | LPB072_RS06420 | Not Available | Positive | 1373324 - 1374784 | 52658.9 |
| nudix domain-containing protein | LPB072_RS06425 | Not Available | Negative | 1374847 - 1375455 | 22566.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
