Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | LPB072_RS00610 | Not Available | Negative | 123605 - 124537 | 32872.4 |
| yran family protein | LPB072_RS00615 | Not Available | Positive | 124537 - 124986 | 16158.5 |
| sis domain-containing protein | LPB072_RS00620 | Not Available | Positive | 125015 - 125635 | 21494.7 |
| bon domain-containing protein | LPB072_RS00625 | Not Available | Positive | 125632 - 126252 | 22090.7 |
| nad(p)-dependent oxidoreductase | LPB072_RS00630 | Not Available | Negative | 126311 - 127213 | 31225.5 |
| pilt/pilu family type 4a pilus atpase | LPB072_RS00635 | Not Available | Negative | 127426 - 128562 | 42112.3 |
| type iv pilus twitching motility protein pilt | LPB072_RS00640 | Not Available | Negative | 128707 - 129750 | 38037.9 |
| yggs family pyridoxal phosphate-dependent enzyme | LPB072_RS00645 | Not Available | Positive | 129789 - 130496 | 25394.6 |
| duf3617 domain-containing protein | LPB072_RS00650 | Not Available | Negative | 130554 - 131117 | 19930.3 |
| lrp/asnc ligand binding domain-containing protein | LPB072_RS00655 | Not Available | Negative | 131173 - 131661 | 18108.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
