Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase family protein | LPB072_RS06330 | Not Available | Negative | 1353668 - 1354663 | 35332.2 |
| duf4405 domain-containing protein | LPB072_RS06335 | Not Available | Negative | 1354785 - 1355123 | 12316.5 |
| atp-binding protein | LPB072_RS06340 | Not Available | Negative | 1355174 - 1356472 | 47925.1 |
| response regulator transcription factor | LPB072_RS06345 | Not Available | Negative | 1356453 - 1357127 | 24363.7 |
| mipa/ompv family protein | LPB072_RS06350 | Not Available | Negative | 1357143 - 1357922 | 27629.9 |
| hypothetical protein | LPB072_RS06355 | Not Available | Negative | 1358078 - 1358464 | 13538.7 |
| abc transporter atp-binding protein | LPB072_RS06360 | Not Available | Negative | 1358473 - 1359204 | 26390.1 |
| abc transporter permease | LPB072_RS06365 | Not Available | Negative | 1359201 - 1360391 | 41854.4 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS06370 | Not Available | Negative | 1360388 - 1361590 | 41541.0 |
| tetr/acrr family transcriptional regulator | LPB072_RS06375 | Not Available | Negative | 1361645 - 1362253 | 21617.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
