Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | LPB072_RS06280 | Not Available | Positive | 1342177 - 1343727 | 54895.6 |
| abc transporter permease | LPB072_RS06285 | Not Available | Positive | 1343714 - 1344769 | 37355.8 |
| abc transporter permease | LPB072_RS06290 | Not Available | Positive | 1344881 - 1345801 | 32111.2 |
| bmp family abc transporter substrate-binding protein | LPB072_RS06295 | Not Available | Positive | 1345925 - 1347070 | 40215.7 |
| aromatic ring-hydroxylating oxygenase subunit alpha | LPB072_RS06300 | Not Available | Positive | 1347268 - 1348320 | 38472.2 |
| adenosine deaminase | LPB072_RS06305 | Not Available | Positive | 1348408 - 1349415 | 37064.8 |
| atp-binding protein | LPB072_RS06310 | Not Available | Positive | 1349457 - 1351112 | 59306.6 |
| winged helix-turn-helix domain-containing protein | LPB072_RS06315 | Not Available | Positive | 1351109 - 1351813 | 26017.5 |
| 2og-fe(ii) oxygenase | LPB072_RS06320 | Not Available | Positive | 1351976 - 1352953 | 37232.4 |
| glutathione peroxidase | LPB072_RS06325 | Not Available | Negative | 1353044 - 1353622 | 20669.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
