Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | LPB072_RS06085 | Not Available | Negative | 1297540 - 1298307 | 28178.4 |
| abc transporter atp-binding protein | LPB072_RS06090 | Not Available | Negative | 1298307 - 1299284 | 35738.1 |
| ycii family protein | LPB072_RS23835 | Not Available | Positive | 1299443 - 1299796 | 12890.4 |
| rna polymerase sigma factor | LPB072_RS06100 | Not Available | Positive | 1299793 - 1301016 | 44117.3 |
| zinc-binding alcohol dehydrogenase family protein | LPB072_RS06105 | Not Available | Negative | 1301084 - 1302091 | 36019.6 |
| mannitol dehydrogenase family protein | LPB072_RS06110 | Not Available | Negative | 1302174 - 1303691 | 54657.5 |
| d-mannonate dehydratase mand | LPB072_RS06115 | Not Available | Negative | 1303691 - 1304902 | 45155.9 |
| uxaa family hydrolase | LPB072_RS06120 | Not Available | Negative | 1304924 - 1306456 | 53378.3 |
| fumarylacetoacetate hydrolase family protein | LPB072_RS06125 | Not Available | Negative | 1306449 - 1307315 | 30892.1 |
| sdr family oxidoreductase | LPB072_RS06130 | Not Available | Negative | 1307351 - 1308106 | 26214.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
