Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent cysteine synthase family protein | LPB072_RS05990 | Not Available | Negative | 1275052 - 1276113 | 38902.1 |
| abc transporter permease | LPB072_RS05995 | Not Available | Negative | 1276301 - 1278859 | 88826.3 |
| hypothetical protein | LPB072_RS23665 | Not Available | Positive | 1278956 - 1279123 | 5988.23 |
| marr family winged helix-turn-helix transcriptional regulator | LPB072_RS06000 | Not Available | Positive | 1279296 - 1279772 | 17567.5 |
| efflux transporter outer membrane subunit | LPB072_RS06005 | Not Available | Positive | 1279849 - 1281324 | 51325.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | LPB072_RS06010 | Not Available | Positive | 1281379 - 1282722 | 47244.2 |
| dha2 family efflux mfs transporter permease subunit | LPB072_RS06015 | Not Available | Positive | 1282747 - 1284363 | 57192.6 |
| class i sam-dependent methyltransferase | LPB072_RS06020 | Not Available | Negative | 1284337 - 1285035 | 25214.7 |
| thiamine abc transporter substrate binding subunit | LPB072_RS06025 | Not Available | Positive | 1285430 - 1286383 | 34131.9 |
| abc transporter permease | LPB072_RS06030 | Not Available | Positive | 1286515 - 1288140 | 58138.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
