Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| barstar family protein | LPB072_RS24190 | Not Available | Negative | 1266280 - 1266417 | 5087.34 |
| smr/muts family protein | LPB072_RS05945 | Not Available | Negative | 1266441 - 1267100 | 24533.7 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | LPB072_RS05950 | Not Available | Positive | 1267370 - 1268476 | 39531.0 |
| voc family protein | LPB072_RS05955 | Not Available | Positive | 1268677 - 1269045 | 12213.3 |
| glxa family transcriptional regulator | LPB072_RS05960 | Not Available | Negative | 1269089 - 1270114 | 36726.4 |
| radc family protein | LPB072_RS05965 | Not Available | Negative | 1270223 - 1270915 | 24674.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | LPB072_RS05970 | Not Available | Positive | 1271056 - 1271502 | 15930.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | LPB072_RS05975 | Not Available | Positive | 1271502 - 1272485 | 35765.1 |
| serine--trna ligase | LPB072_RS05980 | Not Available | Positive | 1272592 - 1273902 | 48159.7 |
| barstar family protein | LPB072_RS05985 | Not Available | Negative | 1273899 - 1275031 | 41112.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
