Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | LPB072_RS05850 | Not Available | Negative | 1240137 - 1242191 | 75577.2 |
| duf2889 domain-containing protein | LPB072_RS05855 | Not Available | Positive | 1242449 - 1242967 | 19777.9 |
| serine hydrolase domain-containing protein | LPB072_RS05860 | Not Available | Negative | 1243089 - 1244213 | 40442.6 |
| pace efflux transporter | LPB072_RS05865 | Not Available | Positive | 1244320 - 1244751 | 15715.6 |
| benzoate-coa ligase family protein | LPB072_RS05870 | Not Available | Negative | 1244765 - 1246339 | 56903.7 |
| 3,4-dehydroadipyl-coa semialdehyde dehydrogenase | LPB072_RS05875 | Not Available | Negative | 1246371 - 1247948 | 55614.4 |
| helix-turn-helix transcriptional regulator | LPB072_RS05880 | Not Available | Positive | 1248130 - 1249068 | 33718.2 |
| 2,3-epoxybenzoyl-coa dihydrolase | LPB072_RS05885 | Not Available | Positive | 1249172 - 1250839 | 60498.2 |
| benzoyl-coa 2,3-epoxidase subunit boxb | LPB072_RS05890 | Not Available | Positive | 1250977 - 1252404 | 54256.8 |
| benzoyl-coa 2,3-epoxidase subunit boxa | LPB072_RS05895 | Not Available | Positive | 1252720 - 1254009 | 46807.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
