Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein uref | LPB072_RS05755 | Not Available | Negative | 1217025 - 1217726 | 25163.0 |
| urease accessory protein uree | LPB072_RS05760 | Not Available | Negative | 1217719 - 1218252 | 19283.9 |
| urease subunit alpha | LPB072_RS05765 | Not Available | Negative | 1218270 - 1219988 | 60804.7 |
| urease subunit beta | LPB072_RS05770 | Not Available | Negative | 1219991 - 1220296 | 10966.0 |
| hypothetical protein | LPB072_RS23360 | Not Available | Negative | 1220307 - 1220474 | 5774.18 |
| urease subunit gamma | LPB072_RS05775 | Not Available | Negative | 1220616 - 1220918 | 10932.4 |
| atp-binding protein | LPB072_RS05780 | Not Available | Positive | 1221199 - 1224714 | 127892.0 |
| response regulator transcription factor | LPB072_RS05785 | Not Available | Positive | 1224711 - 1225745 | 37223.8 |
| urea abc transporter substrate-binding protein | LPB072_RS05790 | Not Available | Positive | 1226108 - 1227370 | 45774.1 |
| urea abc transporter permease subunit urtb | LPB072_RS05795 | Not Available | Positive | 1227490 - 1229094 | 56492.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
