Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional riboflavin kinase/fad synthetase | LPB072_RS05605 | Not Available | Negative | 1186755 - 1187840 | 39185.8 |
| hnh endonuclease | LPB072_RS05610 | Not Available | Positive | 1187984 - 1188541 | 20930.2 |
| acyl-coa dehydrogenase family protein | LPB072_RS05615 | Not Available | Negative | 1188657 - 1189772 | 39720.5 |
| acyl-coa dehydrogenase family protein | LPB072_RS05620 | Not Available | Negative | 1189785 - 1190966 | 43783.5 |
| yceh family protein | LPB072_RS05625 | Not Available | Negative | 1191041 - 1191754 | 26019.2 |
| phosphoribosylglycinamide formyltransferase | LPB072_RS05630 | Not Available | Positive | 1191839 - 1192375 | 19275.2 |
| duf3820 family protein | LPB072_RS05635 | Not Available | Negative | 1192383 - 1192610 | 8645.38 |
| peptide chain release factor 3 | LPB072_RS05640 | Not Available | Negative | 1192625 - 1194244 | 59669.9 |
| rsmb/nop family class i sam-dependent rna methyltransferase | LPB072_RS05645 | Not Available | Positive | 1194522 - 1195796 | 46598.0 |
| acyl-coa desaturase | LPB072_RS05650 | Not Available | Positive | 1195973 - 1197175 | 45313.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
