Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | LPB072_RS05555 | Not Available | Negative | 1172640 - 1175924 | 119052.0 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS05560 | Not Available | Negative | 1175845 - 1177008 | 40406.5 |
| tetr/acrr family transcriptional regulator | LPB072_RS05565 | Not Available | Negative | 1177014 - 1177688 | 24932.1 |
| dmt family transporter | LPB072_RS05570 | Not Available | Negative | 1177812 - 1178750 | 33325.6 |
| quinone oxidoreductase family protein | LPB072_RS05575 | Not Available | Positive | 1178878 - 1179882 | 35365.8 |
| hypothetical protein | LPB072_RS05580 | Not Available | Negative | 1180004 - 1180636 | 21889.4 |
| transglycosylase slt domain-containing protein | LPB072_RS05585 | Not Available | Negative | 1180907 - 1181869 | 34623.2 |
| aminotransferase class v-fold plp-dependent enzyme | LPB072_RS05590 | Not Available | Negative | 1181891 - 1183036 | 41220.8 |
| signal peptidase ii | LPB072_RS05595 | Not Available | Negative | 1183182 - 1183691 | 18615.9 |
| isoleucine--trna ligase | LPB072_RS05600 | Not Available | Negative | 1183691 - 1186540 | 104745.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
