Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | LPB072_RS05505 | Not Available | Negative | 1161429 - 1161989 | 20137.0 |
| alka n-terminal domain-containing protein | LPB072_RS05510 | Not Available | Negative | 1161986 - 1163527 | 56798.2 |
| phosphomannomutase/phosphoglucomutase | LPB072_RS05515 | Not Available | Positive | 1163644 - 1165026 | 49082.9 |
| glycosyltransferase family 2 protein | LPB072_RS05520 | Not Available | Positive | 1165073 - 1165939 | 32032.7 |
| o-antigen ligase family protein | LPB072_RS05525 | Not Available | Positive | 1165932 - 1167224 | 47571.7 |
| 3-deoxy-d-manno-octulosonic acid kinase | LPB072_RS05530 | Not Available | Negative | 1167242 - 1169191 | 71168.7 |
| glycosyltransferase | LPB072_RS05535 | Not Available | Negative | 1169248 - 1169991 | 28441.0 |
| tolc family outer membrane protein | LPB072_RS05540 | Not Available | Negative | 1170119 - 1171492 | 48974.1 |
| rhodanese-like domain-containing protein | LPB072_RS05545 | Not Available | Negative | 1171526 - 1171876 | 12973.5 |
| protein-l-isoaspartate o-methyltransferase family protein | LPB072_RS05550 | Not Available | Negative | 1171905 - 1172597 | 24742.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
