Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | LPB072_RS05455 | Not Available | Positive | 1152981 - 1154333 | 47836.4 |
| spor domain-containing protein | LPB072_RS05460 | Not Available | Positive | 1154408 - 1155244 | 29006.7 |
| cvpa family protein | LPB072_RS05465 | Not Available | Positive | 1155279 - 1155764 | 16834.3 |
| amidophosphoribosyltransferase | LPB072_RS05470 | Not Available | Positive | 1155800 - 1157302 | 54658.5 |
| o-succinylhomoserine sulfhydrylase | LPB072_RS05475 | Not Available | Positive | 1157320 - 1158534 | 42985.5 |
| glutamate--trna ligase | LPB072_RS05480 | Not Available | Positive | 1158537 - 1159922 | 51165.3 |
| Trna-ala | Not Available | Not Available | Positive | 1159999 - 1160074 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1160148 - 1160223 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1160280 - 1160356 | Not Available |
| dmt family transporter | LPB072_RS05500 | Not Available | Negative | 1160477 - 1161388 | 31525.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
