Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | LPB072_RS00510 | Not Available | Negative | 104227 - 104481 | 8758.71 |
| nadph-dependent fmn reductase | LPB072_RS00515 | Not Available | Negative | 104481 - 105074 | 21324.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | LPB072_RS00520 | Not Available | Positive | 105248 - 107227 | 72470.6 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | LPB072_RS00525 | Not Available | Positive | 107224 - 107874 | 23179.3 |
| lyse family transporter | LPB072_RS00530 | Not Available | Positive | 107974 - 108588 | 21650.3 |
| para family protein | LPB072_RS00535 | Not Available | Positive | 108597 - 109436 | 29903.3 |
| rbbp9/yden family alpha/beta hydrolase | LPB072_RS00540 | Not Available | Positive | 109453 - 110001 | 20112.8 |
| parb/repb/spo0j family partition protein | LPB072_RS00545 | Not Available | Positive | 110004 - 110939 | 34025.3 |
| hypothetical protein | LPB072_RS00550 | Not Available | Negative | 111281 - 112120 | 28321.5 |
| tetratricopeptide repeat protein | LPB072_RS00555 | Not Available | Negative | 112187 - 112768 | 22009.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
