Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter permease ugpe | LPB072_RS05070 | Not Available | Negative | 1049648 - 1050502 | 31462.6 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | LPB072_RS05075 | Not Available | Negative | 1050622 - 1051503 | 32618.3 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | LPB072_RS05080 | Not Available | Negative | 1051602 - 1052924 | 47313.3 |
| duf3683 domain-containing protein | LPB072_RS05085 | Not Available | Positive | 1053107 - 1057012 | 144028.0 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | LPB072_RS05090 | Not Available | Positive | 1057163 - 1057576 | 15001.5 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | LPB072_RS05095 | Not Available | Positive | 1057593 - 1058324 | 26703.5 |
| tim44 domain-containing protein | LPB072_RS05100 | Not Available | Positive | 1058362 - 1059180 | 28699.8 |
| scp2 domain-containing protein | LPB072_RS05105 | Not Available | Positive | 1059229 - 1059822 | 21161.3 |
| ubiquinone biosynthesis regulatory protein kinase ubib | LPB072_RS05110 | Not Available | Positive | 1059819 - 1061384 | 60107.9 |
| fmdb family zinc ribbon protein | LPB072_RS22990 | Not Available | Positive | 1061539 - 1061889 | 11558.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
