Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | LPB072_RS05020 | Not Available | Positive | 1039832 - 1041577 | 63988.9 |
| lytic transglycosylase domain-containing protein | LPB072_RS05025 | Not Available | Positive | 1041574 - 1042230 | 24237.1 |
| aaa family atpase | LPB072_RS05030 | Not Available | Negative | 1042571 - 1043575 | 36926.0 |
| grx4 family monothiol glutaredoxin | LPB072_RS05035 | Not Available | Negative | 1043740 - 1044063 | 11690.2 |
| peptide chain release factor n(5)-glutamine methyltransferase | LPB072_RS05040 | Not Available | Negative | 1044111 - 1044944 | 30077.0 |
| peptide chain release factor 1 | LPB072_RS05045 | Not Available | Negative | 1045051 - 1046133 | 39774.0 |
| glutamyl-trna reductase | LPB072_RS05050 | Not Available | Negative | 1046224 - 1047516 | 46903.5 |
| hypothetical protein | LPB072_RS05055 | Not Available | Positive | 1047565 - 1047834 | 9988.9 |
| glycerophosphodiester phosphodiesterase | LPB072_RS05060 | Not Available | Negative | 1047838 - 1048602 | 27879.1 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | LPB072_RS05065 | Not Available | Negative | 1048599 - 1049603 | 36819.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
