Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | LPB072_RS04970 | Not Available | Negative | 1030010 - 1030624 | 21871.3 |
| prepilin peptidase | LPB072_RS04975 | Not Available | Negative | 1030621 - 1031475 | 30543.7 |
| type ii secretion system f family protein | LPB072_RS04980 | Not Available | Negative | 1031475 - 1032692 | 44609.0 |
| type iv-a pilus assembly atpase pilb | LPB072_RS04985 | Not Available | Negative | 1032723 - 1034462 | 62873.0 |
| polyprenyl synthetase family protein | LPB072_RS04990 | Not Available | Negative | 1034757 - 1035686 | 33567.4 |
| 50s ribosomal protein l21 | LPB072_RS04995 | Not Available | Positive | 1035962 - 1036273 | 11302.8 |
| 50s ribosomal protein l27 | LPB072_RS05000 | Not Available | Positive | 1036289 - 1036546 | 8894.81 |
| obg family gtpase cgta | LPB072_RS05005 | Not Available | Positive | 1036676 - 1037755 | 39141.9 |
| glutamate 5-kinase | LPB072_RS05010 | Not Available | Positive | 1037797 - 1038960 | 41291.0 |
| rna pyrophosphohydrolase | LPB072_RS05015 | Not Available | Negative | 1038997 - 1039644 | 25345.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
