Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clpxp protease specificity-enhancing factor | LPB072_RS22975 | Not Available | Positive | 1021265 - 1021816 | 19574.0 |
| Trna-thr | Not Available | Not Available | Positive | 1021828 - 1021903 | Not Available |
| dcia family protein | LPB072_RS04935 | Not Available | Negative | 1021961 - 1022212 | 9271.67 |
| m23 family metallopeptidase | LPB072_RS04940 | Not Available | Positive | 1022332 - 1023273 | 33901.1 |
| preprotein translocase subunit seca | LPB072_RS04945 | Not Available | Positive | 1023574 - 1026324 | 102539.0 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | LPB072_RS04950 | Not Available | Positive | 1026397 - 1027644 | 43899.6 |
| atp-binding protein | LPB072_RS04955 | Not Available | Positive | 1027641 - 1028528 | 32654.7 |
| nudix domain-containing protein | LPB072_RS04960 | Not Available | Positive | 1028539 - 1028988 | 16612.0 |
| dna gyrase inhibitor yacg | LPB072_RS22980 | Not Available | Negative | 1029005 - 1029211 | 7464.37 |
| cell division protein zapd | LPB072_RS04965 | Not Available | Negative | 1029211 - 1029966 | 28599.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
