Streptomyces rubrolavendulae strain MJM4426

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces rubrolavendulae strain MJM4426 is a species within the genus Streptomyces, notable for its presence of flagella, which are structures that facilitate motility. This trait may enable the bacterium to navigate its environment more effectively, potentially influencing its ecological interactions and nutrient acquisition. The strain is characterized by having a single replicon, indicating a relatively simple genetic architecture. The presence of one replicon can suggest a streamlined genomic organization, which may be advantageous for the organism in terms of replication efficiency and adaptability to environmental changes. The strain is documented with the accession number NZ_CP017316.1, which provides a reference for its genomic sequence and associated data. This genomic information is crucial for understanding the metabolic pathways and potential bioactive compounds produced by S. rubrolavendulae, which is known for its role in natural product biosynthesis. In terms of ecological insight, the ability to move via flagella may enhance the strain's ability to colonize various substrates or environments, potentially allowing it to exploit diverse ecological niches. This motility could contribute to its survival and competitive advantage in environments where nutrient availability fluctuates, highlighting the ecological significance of motility in microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rubrolavendulae
Strainstrain MJM4426

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces rubrolavendulae strain MJM4426
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces rubrolavendulae strain MJM4426 chromosome, complete

Gene Summary

Adenine Count

824751 bp

Thymine Count

825176 bp

Guanine Count

2448795 bp

Cytosine Count

2444540 bp

Genome Length

6543262 bp

Protein-coding Genes

5425 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-dicarboxylate abc transporterA4G23_RS04195Not AvailablePositive1010443 - 101148334487.5
helical backbone metal receptorA4G23_RS04200Not AvailableNegative1011410 - 101212925558.5
helix-turn-helix domain-containing proteinA4G23_RS04205Not AvailableNegative1012129 - 101268620023.6
5'-3' exonucleaseA4G23_RS04210Not AvailablePositive1012824 - 101373232115.4
siderophore-interacting proteinA4G23_RS04215Not AvailablePositive1013781 - 101462030942.4
hypothetical proteinA4G23_RS27505Not AvailablePositive1015355 - 101701655096.6
merr family transcriptional regulatorA4G23_RS04225Not AvailableNegative1017243 - 101791423740.0
rna helicaseA4G23_RS04230Not AvailableNegative1018212 - 1021040105286.0
twin-arginine translocase subunit tatcA4G23_RS04235Not AvailableNegative1021257 - 102220133998.0
sec-independent protein translocase subunit tataA4G23_RS04240Not AvailableNegative1022290 - 10225689487.52

Displaying genes 891 – 900 of 5538 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

16 records
Metabolite IDMetabolite nameStructureCAS number
BASm00046422-deoxy-L-scyllo-inososeC6H10O5Chemical structure of 2-deoxy-L-scyllo-inososeNot available
Average162.141Da
Monoisotopic162.052823422Da
BASm00046953-amino-2,3-dideoxy-scyllo-inososeC6H12NO4Not availableNot available
Average162.164Da
Monoisotopic162.076084291Da
BASm00046962-deoxy-scyllo-inosamineC6H13NO4Chemical structure of 2-deoxy-scyllo-inosamineNot available
Average163.1717Da
Monoisotopic163.0844579Da
BASm00046982'-N-acetylparomamineC14H27N3O8Chemical structure of 2'-N-acetylparomamineNot available
Average365.383Da
Monoisotopic365.1798148Da
BASm0004699paromamineC12H25N3O7Chemical structure of paromamineNot available
Average323.346Da
Monoisotopic323.1692502Da
BASm00047006'-oxoparomamineC12H23N3O7Chemical structure of 6'-oxoparomamineNot available
Average321.33Da
Monoisotopic321.1536001Da
BASm00047022'''-acetyl-6'''-hydroxyneomycin CC25H47N5O15Chemical structure of 2'''-acetyl-6'''-hydroxyneomycin CNot available
Average657.671Da
Monoisotopic657.3068658Da
BASm00047036'''-deamino-6'''-hydroxyneomycin CC23H45N5O14Chemical structure of 6'''-deamino-6'''-hydroxyneomycin CNot available
Average615.634Da
Monoisotopic615.2963011Da
BASm00047186'''-deamino-6'''-oxoneomycin CC23H43N5O14Chemical structure of 6'''-deamino-6'''-oxoneomycin CNot available
Average613.618Da
Monoisotopic613.2806511Da
BASm00047192-deoxystreptamineC6H14N2O3Chemical structure of 2-deoxystreptamineNot available
Average162.187Da
Monoisotopic162.1004423Da

Displaying 1–10 of 16 metabolites

Health Effects

No health effects information available for this bacterium.