Pseudomonas sp. LPH1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LPH1 is characterized by possessing a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and potential for efficient replication under varying environmental conditions. The accession number for this strain is NZ_CP017290.1, which allows for its identification and retrieval in genomic databases for further study. Pseudomonas species are known for their metabolic versatility, which enables them to thrive in diverse ecological niches. This versatility often includes the ability to degrade various organic compounds and adapt to different environmental stresses. While the specific metabolic capabilities of Pseudomonas sp. LPH1 are not detailed here, the genus is generally associated with significant ecological roles, including bioremediation and nutrient cycling in various ecosystems. The presence of a single replicon may also suggest a streamlined genome, which could be advantageous for the organism in competitive environments. This could allow Pseudomonas sp. LPH1 to efficiently utilize available resources, potentially impacting microbial community dynamics. In conclusion, Pseudomonas sp. LPH1, with its single replicon and the associated traits of the Pseudomonas genus, may play a valuable role in its ecological niche, possibly contributing to biogeochemical processes and influencing the dynamics of microbial communities in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LPH1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LPH1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LPH1 chromosome, complete genome.

Gene Summary

Adenine Count

974750 bp

Thymine Count

975056 bp

Guanine Count

1643653 bp

Cytosine Count

1636036 bp

Genome Length

5229495 bp

Protein-coding Genes

4779 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite tricarboxylate transporter substrate binding proteinBHQ29_RS02600Not AvailableNegative555661 - 55666235552.9
tripartite tricarboxylate transporter permeaseBHQ29_RS02605Not AvailableNegative556730 - 55824452427.0
tripartite tricarboxylate transporter tctb family proteinBHQ29_RS02610Not AvailableNegative558258 - 55872817135.6
iclr family transcriptional regulatorBHQ29_RS02615Not AvailablePositive559427 - 56020327677.1
gfo/idh/moca family proteinBHQ29_RS02620Not AvailablePositive560521 - 56157037769.2
sugar phosphate isomerase/epimerase family proteinBHQ29_RS02625Not AvailablePositive561584 - 56240229888.9
dmt family transporterBHQ29_RS02630Not AvailablePositive562508 - 56339231524.1
3-dehydroshikimate dehydratase quicBHQ29_RS02635Not AvailablePositive563584 - 56549170421.5
tetr/acrr family transcriptional regulatorBHQ29_RS02640Not AvailablePositive565578 - 56624925630.0
shikimate dehydrogenaseBHQ29_RS02645Not AvailableNegative566320 - 56717129777.1

Displaying genes 521 – 530 of 4860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.