Pseudomonas sp. LPH1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. LPH1 is characterized by possessing a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and potential for efficient replication under varying environmental conditions. The accession number for this strain is NZ_CP017290.1, which allows for its identification and retrieval in genomic databases for further study. Pseudomonas species are known for their metabolic versatility, which enables them to thrive in diverse ecological niches. This versatility often includes the ability to degrade various organic compounds and adapt to different environmental stresses. While the specific metabolic capabilities of Pseudomonas sp. LPH1 are not detailed here, the genus is generally associated with significant ecological roles, including bioremediation and nutrient cycling in various ecosystems. The presence of a single replicon may also suggest a streamlined genome, which could be advantageous for the organism in competitive environments. This could allow Pseudomonas sp. LPH1 to efficiently utilize available resources, potentially impacting microbial community dynamics. In conclusion, Pseudomonas sp. LPH1, with its single replicon and the associated traits of the Pseudomonas genus, may play a valuable role in its ecological niche, possibly contributing to biogeochemical processes and influencing the dynamics of microbial communities in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. LPH1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. LPH1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. LPH1 chromosome, complete genome.

Gene Summary

Adenine Count

974750 bp

Thymine Count

975056 bp

Guanine Count

1643653 bp

Cytosine Count

1636036 bp

Genome Length

5229495 bp

Protein-coding Genes

4779 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
symmetrical bis(5'-nucleosyl)-tetraphosphataseBHQ29_RS01800Not AvailableNegative399827 - 40064530499.0
co2+/mg2+ efflux protein apagBHQ29_RS01805Not AvailableNegative400645 - 40102513680.1
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaBHQ29_RS01810Not AvailableNegative401055 - 40186430114.5
4-hydroxythreonine-4-phosphate dehydrogenase pdxaBHQ29_RS01815Not AvailableNegative401978 - 40297335149.9
peptidylprolyl isomeraseBHQ29_RS01820Not AvailableNegative403070 - 40436248491.7
lps-assembly protein lptdBHQ29_RS01825Not AvailableNegative404343 - 407171107046.0
aminoglycoside phosphotransferase family proteinBHQ29_RS01830Not AvailablePositive407296 - 40832138813.4
n-acetylmuramate alpha-1-phosphate uridylyltransferase muruBHQ29_RS01835Not AvailablePositive408318 - 40898923981.1
dnaj domain-containing proteinBHQ29_RS01840Not AvailablePositive408990 - 40975128273.0
alpha/beta hydrolase family proteinBHQ29_RS01845Not AvailableNegative409772 - 41076135150.7

Displaying genes 361 – 370 of 4860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.