Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is characterized by a single replicon, which is a notable trait within the Campylobacter genus. The genetic information for this strain can be found under the accession number NZ_CP017258.1, indicating its sequence data is accessible for further research and analysis. This strain belongs to the Campylobacter genus, which is known for its significance in both clinical and environmental microbiology. Campylobacter species are primarily associated with gastrointestinal infections in humans and are commonly found in various animal hosts. The specific subspecies, C. pinnipediorum subsp. caledonicus, suggests a potential association with marine mammals, particularly seals, which are significant reservoirs of Campylobacter. Understanding the traits of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is crucial for studying the ecology of Campylobacter in marine environments and its transmission pathways to humans. The single replicon may play a role in the strain's genetic stability and adaptability in its marine habitat. Research on this strain can contribute to a better understanding of the ecology of Campylobacter in marine ecosystems and its implications for public health, particularly regarding zoonotic transmission.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter pinnipediorum
Strainsubsp. caledonicus strain M341/11/05

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05


Gene Summary

Adenine Count

612206 bp

Thymine Count

610288 bp

Guanine Count

268928 bp

Cytosine Count

266915 bp

Genome Length

1758337 bp

Protein-coding Genes

1694 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (cytidine(34)-2'-o)-methyltransferaseCPIN18021_RS03825Not AvailableNegative744876 - 74535518223.1
formyltetrahydrofolate deformylaseCPIN18021_RS03830Not AvailableNegative745355 - 74618831900.4
endopeptidase laCPIN18021_RS03835Not AvailableNegative746220 - 74862890961.0
outer membrane protein assembly factor bamdCPIN18021_RS03840Not AvailableNegative748638 - 74928525360.7
flagellar assembly protein fliwCPIN18021_RS03845Not AvailablePositive749425 - 74980814777.9
hypothetical proteinCPIN18021_RS03850Not AvailablePositive749824 - 752979120192.0
prepilin-type n-terminal cleavage/methylation domain-containing proteinCPIN18021_RS03855Not AvailablePositive752976 - 75372228106.3
type iv pilin proteinCPIN18021_RS03860Not AvailablePositive753719 - 75462134009.6
hypothetical proteinCPIN18021_RS03865Not AvailablePositive754622 - 75509517785.9
ribosome hibernation-promoting factor, hpf/yfia familyCPIN18021_RS03870Not AvailablePositive755155 - 75568220238.5

Displaying genes 841 – 850 of 1795 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.