Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is characterized by a single replicon, which is a notable trait within the Campylobacter genus. The genetic information for this strain can be found under the accession number NZ_CP017258.1, indicating its sequence data is accessible for further research and analysis. This strain belongs to the Campylobacter genus, which is known for its significance in both clinical and environmental microbiology. Campylobacter species are primarily associated with gastrointestinal infections in humans and are commonly found in various animal hosts. The specific subspecies, C. pinnipediorum subsp. caledonicus, suggests a potential association with marine mammals, particularly seals, which are significant reservoirs of Campylobacter. Understanding the traits of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is crucial for studying the ecology of Campylobacter in marine environments and its transmission pathways to humans. The single replicon may play a role in the strain's genetic stability and adaptability in its marine habitat. Research on this strain can contribute to a better understanding of the ecology of Campylobacter in marine ecosystems and its implications for public health, particularly regarding zoonotic transmission.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter pinnipediorum
Strainsubsp. caledonicus strain M341/11/05

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05


Gene Summary

Adenine Count

612206 bp

Thymine Count

610288 bp

Guanine Count

268928 bp

Cytosine Count

266915 bp

Genome Length

1758337 bp

Protein-coding Genes

1694 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fumarate hydrataseCPIN18021_RS00410Not AvailablePositive98084 - 9892930233.8
fe-s-containing hydro-lyaseCPIN18021_RS00415Not AvailablePositive98941 - 9950119811.1
ycei family proteinCPIN18021_RS00420Not AvailableNegative99548 - 10009320065.2
atp-binding proteinCPIN18021_RS00425Not AvailableNegative100366 - 10145442109.0
hypothetical proteinCPIN18021_RS00430Not AvailableNegative101497 - 10193417134.6
acetyl-coa carboxylase biotin carboxylase subunitCPIN18021_RS00435Not AvailableNegative101985 - 10331649479.7
acetyl-coa carboxylase biotin carboxyl carrier proteinCPIN18021_RS00440Not AvailableNegative103316 - 10375616033.4
dctp deaminaseCPIN18021_RS00445Not AvailablePositive103973 - 10453320587.8
udp-n-acetylglucosamine 4,6-dehydratase (inverting)CPIN18021_RS00450Not AvailablePositive104579 - 10556536999.2
udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminaseCPIN18021_RS00455Not AvailablePositive105562 - 10667441263.4

Displaying genes 171 – 180 of 1795 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.