Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is characterized by a single replicon, which is a notable trait within the Campylobacter genus. The genetic information for this strain can be found under the accession number NZ_CP017258.1, indicating its sequence data is accessible for further research and analysis. This strain belongs to the Campylobacter genus, which is known for its significance in both clinical and environmental microbiology. Campylobacter species are primarily associated with gastrointestinal infections in humans and are commonly found in various animal hosts. The specific subspecies, C. pinnipediorum subsp. caledonicus, suggests a potential association with marine mammals, particularly seals, which are significant reservoirs of Campylobacter. Understanding the traits of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is crucial for studying the ecology of Campylobacter in marine environments and its transmission pathways to humans. The single replicon may play a role in the strain's genetic stability and adaptability in its marine habitat. Research on this strain can contribute to a better understanding of the ecology of Campylobacter in marine ecosystems and its implications for public health, particularly regarding zoonotic transmission.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter pinnipediorum
Strainsubsp. caledonicus strain M341/11/05

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05


Gene Summary

Adenine Count

612206 bp

Thymine Count

610288 bp

Guanine Count

268928 bp

Cytosine Count

266915 bp

Genome Length

1758337 bp

Protein-coding Genes

1694 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2393 family proteinCPIN18021_RS07895Not AvailableNegative1568738 - 156926820915.0
prohibitin family proteinCPIN18021_RS07905Not AvailableNegative1569496 - 157060841017.0
branched-chain amino acid transaminaseCPIN18021_RS07910Not AvailableNegative1570624 - 157153833776.1
thioredoxin-dependent thiol peroxidaseCPIN18021_RS07915Not AvailableNegative1571627 - 157213018904.7
tautomerase family proteinCPIN18021_RS07920Not AvailableNegative1572127 - 15723307561.36
hypothetical proteinCPIN18021_RS07925Not AvailablePositive1572440 - 157286215988.7
hypothetical proteinCPIN18021_RS07930Not AvailablePositive1572872 - 15730546987.25
hypothetical proteinCPIN18021_RS07935Not AvailablePositive1573051 - 157455059439.4
shlb/fhac/hecb family hemolysin secretion/activation proteinCPIN18021_RS07940Not AvailablePositive1574808 - 157643962898.6
hemagglutinin repeat-containing proteinCPIN18021_RS07945Not AvailablePositive1576457 - 1585087315849.0

Displaying genes 1621 – 1630 of 1795 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.