Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is characterized by a single replicon, which is a notable trait within the Campylobacter genus. The genetic information for this strain can be found under the accession number NZ_CP017258.1, indicating its sequence data is accessible for further research and analysis. This strain belongs to the Campylobacter genus, which is known for its significance in both clinical and environmental microbiology. Campylobacter species are primarily associated with gastrointestinal infections in humans and are commonly found in various animal hosts. The specific subspecies, C. pinnipediorum subsp. caledonicus, suggests a potential association with marine mammals, particularly seals, which are significant reservoirs of Campylobacter. Understanding the traits of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is crucial for studying the ecology of Campylobacter in marine environments and its transmission pathways to humans. The single replicon may play a role in the strain's genetic stability and adaptability in its marine habitat. Research on this strain can contribute to a better understanding of the ecology of Campylobacter in marine ecosystems and its implications for public health, particularly regarding zoonotic transmission.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter pinnipediorum
Strainsubsp. caledonicus strain M341/11/05

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05


Gene Summary

Adenine Count

612206 bp

Thymine Count

610288 bp

Guanine Count

268928 bp

Cytosine Count

266915 bp

Genome Length

1758337 bp

Protein-coding Genes

1694 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system rele/pare family toxinCPIN18021_RS07745Not AvailablePositive1533626 - 15338237596.51
helix-turn-helix domain-containing proteinCPIN18021_RS07750Not AvailablePositive1533810 - 153408810713.2
flagellin bCPIN18021_RS07755Not AvailablePositive1534415 - 153595353408.3
saccharopine dehydrogenase family proteinCPIN18021_RS07760Not AvailableNegative1536014 - 153723745756.0
rdgb/ham1 family non-canonical purine ntp pyrophosphataseCPIN18021_RS07765Not AvailableNegative1537332 - 153794922911.3
mfs transporterCPIN18021_RS07770Not AvailablePositive1538058 - 153935647422.0
pyruvate:ferredoxin (flavodoxin) oxidoreductaseCPIN18021_RS07775Not AvailablePositive1539502 - 1543047130615.0
autotransporter outer membrane beta-barrel domain-containing proteinCPIN18021_RS07780Not AvailableNegative1543541 - 154575782934.5
nad(p)h-dependent oxidoreductaseCPIN18021_RS07785Not AvailableNegative1545964 - 154659624489.5
atp phosphoribosyltransferaseCPIN18021_RS07790Not AvailableNegative1546614 - 15468357835.27

Displaying genes 1591 – 1600 of 1795 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.