Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is characterized by a single replicon, which is a notable trait within the Campylobacter genus. The genetic information for this strain can be found under the accession number NZ_CP017258.1, indicating its sequence data is accessible for further research and analysis. This strain belongs to the Campylobacter genus, which is known for its significance in both clinical and environmental microbiology. Campylobacter species are primarily associated with gastrointestinal infections in humans and are commonly found in various animal hosts. The specific subspecies, C. pinnipediorum subsp. caledonicus, suggests a potential association with marine mammals, particularly seals, which are significant reservoirs of Campylobacter. Understanding the traits of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05 is crucial for studying the ecology of Campylobacter in marine environments and its transmission pathways to humans. The single replicon may play a role in the strain's genetic stability and adaptability in its marine habitat. Research on this strain can contribute to a better understanding of the ecology of Campylobacter in marine ecosystems and its implications for public health, particularly regarding zoonotic transmission.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter pinnipediorum
Strainsubsp. caledonicus strain M341/11/05

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter pinnipediorum subsp. caledonicus strain M341/11/05


Gene Summary

Adenine Count

612206 bp

Thymine Count

610288 bp

Guanine Count

268928 bp

Cytosine Count

266915 bp

Genome Length

1758337 bp

Protein-coding Genes

1694 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pantoate--beta-alanine ligaseCPIN18021_RS05680Not AvailablePositive1120326 - 112114731029.6
30s ribosomal protein s12 methylthiotransferase rimoCPIN18021_RS05685Not AvailablePositive1121150 - 112245749338.2
trna lysidine(34) synthetase tilsCPIN18021_RS05690Not AvailablePositive1122461 - 112345939076.4
16s rrna (uracil(1498)-n(3))-methyltransferaseCPIN18021_RS05695Not AvailableNegative1123417 - 112407025084.2
hypothetical proteinCPIN18021_RS05700Not AvailableNegative1124072 - 112447315457.8
hypothetical proteinCPIN18021_RS05705Not AvailableNegative1124470 - 11246617257.66
6-pyruvoyl trahydropterin synthase family proteinCPIN18021_RS05710Not AvailableNegative1124661 - 112524222327.8
7-carboxy-7-deazaguanine synthase queeCPIN18021_RS05715Not AvailableNegative1125242 - 112600028840.0
gtp 3',8-cyclase moaaCPIN18021_RS05720Not AvailableNegative1126000 - 112696836648.5
flagellinCPIN18021_RS05725Not AvailableNegative1127093 - 112785727293.5

Displaying genes 1171 – 1180 of 1795 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.