Aeromonas salmonicida subsp. masoucida strain RFAS1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas salmonicida subsp. masoucida strain RFAS1 is a Gram-negative, rod-shaped bacterium that thrives in aquatic habitats. This strain is characterized as a heterotroph, meaning it derives its energy from organic compounds. It is a facultative anaerobe, capable of surviving in both aerobic and anaerobic environments, which enhances its adaptability to varying oxygen levels in aquatic ecosystems. This strain possesses flagella, granting it motility, which is advantageous for navigating through water and potentially accessing nutrient sources. Aeromonas salmonicida subsp. masoucida RFAS1 is mesophilic, indicating that it grows optimally at moderate temperatures, typical of many freshwater environments. The genetic structure of RFAS1 is notable for containing two replicons and two membranes, which are characteristics of its cellular organization. This structural feature may play a role in its adaptability and survival in diverse ecological niches. As a free-living organism, RFAS1 contributes to the microbial community dynamics within aquatic environments. Its ability to utilize organic matter can influence nutrient cycling and support the health of aquatic ecosystems. Understanding the traits of this strain can provide insights into its ecological roles and interactions within its habitat, particularly in relation to water quality and the health of aquatic organisms. Accessions for this strain are documented as NZ_CP017144.1 and NZ_CP017145.1, which can be referenced for further genetic and genomic information.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas salmonicida
Strainsubsp. masoucida strain RFAS1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Aeromonas salmonicida subsp. masoucida strain RFAS1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Aeromonas salmonicida subsp. masoucida strain RFAS1 plasmid

Gene Summary

Adenine Count

16177 bp

Thymine Count

17269 bp

Guanine Count

19428 bp

Cytosine Count

18094 bp

Genome Length

70968 bp

Protein-coding Genes

76 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer mating-pair stabilization protein tragBHG40_RS23015Not AvailableNegative31783 - 34626101811.0
is5-like element isas4 family transposaseBHG40_RS23020Not AvailableNegative34626 - 3599150398.8
type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbbBHG40_RS23025Not AvailableNegative35978 - 3651419461.3
hypothetical proteinBHG40_RS23030Not AvailableNegative36511 - 3684912886.2
type-f conjugative transfer system pilin assembly protein trafBHG40_RS23035Not AvailableNegative36849 - 3770031938.1
type-f conjugative transfer system mating-pair stabilization protein tranBHG40_RS23040Not AvailableNegative37697 - 3955066714.9
hypothetical proteinBHG40_RS23045Not AvailableNegative39547 - 4018223406.2
type-f conjugative transfer system pilin assembly protein trbcBHG40_RS23050Not AvailableNegative40201 - 4081521733.9
conjugal transfer pilus assembly protein trauBHG40_RS23055Not AvailableNegative40825 - 4181435793.5
type-f conjugative transfer system protein trawBHG40_RS23060Not AvailableNegative41811 - 4244023127.7

Displaying genes 31 – 40 of 152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.