Aeromonas salmonicida subsp. masoucida strain RFAS1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas salmonicida subsp. masoucida strain RFAS1 is a Gram-negative, rod-shaped bacterium that thrives in aquatic habitats. This strain is characterized as a heterotroph, meaning it derives its energy from organic compounds. It is a facultative anaerobe, capable of surviving in both aerobic and anaerobic environments, which enhances its adaptability to varying oxygen levels in aquatic ecosystems. This strain possesses flagella, granting it motility, which is advantageous for navigating through water and potentially accessing nutrient sources. Aeromonas salmonicida subsp. masoucida RFAS1 is mesophilic, indicating that it grows optimally at moderate temperatures, typical of many freshwater environments. The genetic structure of RFAS1 is notable for containing two replicons and two membranes, which are characteristics of its cellular organization. This structural feature may play a role in its adaptability and survival in diverse ecological niches. As a free-living organism, RFAS1 contributes to the microbial community dynamics within aquatic environments. Its ability to utilize organic matter can influence nutrient cycling and support the health of aquatic ecosystems. Understanding the traits of this strain can provide insights into its ecological roles and interactions within its habitat, particularly in relation to water quality and the health of aquatic organisms. Accessions for this strain are documented as NZ_CP017144.1 and NZ_CP017145.1, which can be referenced for further genetic and genomic information.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas salmonicida
Strainsubsp. masoucida strain RFAS1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Aeromonas salmonicida subsp. masoucida strain RFAS1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Aeromonas salmonicida subsp. masoucida strain RFAS1 plasmid

Gene Summary

Adenine Count

16177 bp

Thymine Count

17269 bp

Guanine Count

19428 bp

Cytosine Count

18094 bp

Genome Length

70968 bp

Protein-coding Genes

76 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sycd/lcrh family type iii secretion system chaperone acrhBHG40_RS23395Not AvailableNegative27549 - 2808519749.1
type iii secretion system v-tip protein acrvBHG40_RS23400Not AvailableNegative28095 - 2918040194.9
lcrg family type iii secretion system chaperone acrgBHG40_RS23405Not AvailableNegative29190 - 2947410461.6
lcrr family type iii secretion system chaperoneBHG40_RS23410Not AvailableNegative29514 - 2996917019.7
sctv family type iii secretion system export apparatus subunit ascvBHG40_RS23415Not AvailableNegative29966 - 3213179422.1
type iii secretion system chaperone ascyBHG40_RS23420Not AvailableNegative32064 - 3241412921.5
type iii secretion system protein ascxBHG40_RS23425Not AvailableNegative32411 - 3277613576.4
sycn family type iii secretion system chaperone acr2BHG40_RS23430Not AvailableNegative32773 - 3314413738.7
type iii secretion system gatekeeper subunit acr1BHG40_RS23435Not AvailableNegative33141 - 3342210667.7
sctw family type iii secretion system gatekeeper subunit aopnBHG40_RS23440Not AvailableNegative33403 - 3428131909.9

Displaying genes 111 – 120 of 152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.