Aeromonas salmonicida subsp. masoucida strain RFAS1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Aeromonas

Description

Aeromonas salmonicida subsp. masoucida strain RFAS1 is a Gram-negative, rod-shaped bacterium that thrives in aquatic habitats. This strain is characterized as a heterotroph, meaning it derives its energy from organic compounds. It is a facultative anaerobe, capable of surviving in both aerobic and anaerobic environments, which enhances its adaptability to varying oxygen levels in aquatic ecosystems. This strain possesses flagella, granting it motility, which is advantageous for navigating through water and potentially accessing nutrient sources. Aeromonas salmonicida subsp. masoucida RFAS1 is mesophilic, indicating that it grows optimally at moderate temperatures, typical of many freshwater environments. The genetic structure of RFAS1 is notable for containing two replicons and two membranes, which are characteristics of its cellular organization. This structural feature may play a role in its adaptability and survival in diverse ecological niches. As a free-living organism, RFAS1 contributes to the microbial community dynamics within aquatic environments. Its ability to utilize organic matter can influence nutrient cycling and support the health of aquatic ecosystems. Understanding the traits of this strain can provide insights into its ecological roles and interactions within its habitat, particularly in relation to water quality and the health of aquatic organisms. Accessions for this strain are documented as NZ_CP017144.1 and NZ_CP017145.1, which can be referenced for further genetic and genomic information.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusAeromonas
SpeciesAeromonas salmonicida
Strainsubsp. masoucida strain RFAS1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Aeromonas salmonicida subsp. masoucida strain RFAS1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Aeromonas salmonicida subsp. masoucida strain RFAS1 plasmid

Gene Summary

Adenine Count

16177 bp

Thymine Count

17269 bp

Guanine Count

19428 bp

Cytosine Count

18094 bp

Genome Length

70968 bp

Protein-coding Genes

76 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sctc family type iii secretion system outer membrane ring subunit asccBHG40_RS23345Not AvailableNegative18852 - 2070567408.6
yscb family type iii secretion system chaperone ascbBHG40_RS23350Not AvailableNegative20678 - 2110315870.2
type iii secretion system negative regulator exsdBHG40_RS23355Not AvailableNegative21119 - 2193431519.6
helix-turn-helix transcriptional regulatorBHG40_RS23360Not AvailableNegative22054 - 2279728295.3
is5-like element isas4 family transposaseBHG40_RS23365Not AvailablePositive22890 - 2380734611.3
yscw family type iii secretion system pilotinBHG40_RS23370Not AvailableNegative24286 - 2468714833.6
type iii secretion system regulator exseBHG40_RS23375Not AvailableNegative24684 - 249178412.31
type iii secretion system chaperoneBHG40_RS23380Not AvailableNegative24920 - 2536316795.2
type iii secretion system translocon subunit aopdBHG40_RS23385Not AvailableNegative25499 - 2639532418.5
type iii secretion system translocon subunit aopbBHG40_RS23390Not AvailableNegative26408 - 2760141167.2

Displaying genes 101 – 110 of 152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.